I've been watching YouTube videos trying to learn as much as possible about HPTuners. HPT seems to have a VERY robust list of items that can be switched off/on for the SES light. However, I think it is very dependent on the style of ECU you are programming. I've got an LS swap project on my to do list, so I'm planning to take the plunge and get HP Tuners. Having said that, I will be able to answer your question for a 2005 SS SC ECU within a month or two. Their might be a list of available SES codes that can be disabled on the HPTuners forum or even CSS.net... I haven't specifically looked for it on either site yet.
One of the reasons I've been doing this research is that I've read on CSS.net that the LTFT tables freeze when the EVAP system is disconnected. This is going to make getting the VE tables tuned a little more difficult, if it is true. I'm hoping there is a way to turn off the EVAP and still keep the LTFT tables active in HPT. Please excuse my digression from original topic, but it is somewhat related...